Lesson 7: Profile Analysis
On-line GCG Manual
PSIBLAST
Prosite Profiles
Meme and a Motifsearch-like program called Mast
Blocks database
PFAM database
SMART database
Interpro: Combined protein sequence and motif site
CD-Search: Searches libraries of profiles
DART: Gives block domain diagrams of protein and its homologs
SUPERFAMILY: Classifies Proteins According to Superfamily
Sequence Analysis Web Sites Home Page